PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 862056
Common NameARALYDRAFT_661500
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Family G2-like
Protein Properties Length: 420aa    MW: 47762.4 Da    PI: 8.4254
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
862056genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like35.71.9e-11229253226
  G2-like   2 prlrWtpeLHerFveaveqLGGsek 26 
              pr+rWt+ LH+rFv+ave LGG+e+
   862056 229 PRMRWTSSLHARFVHAVELLGGHER 253
              9**********************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.7E-8227254IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009887Biological Processorgan morphogenesis
GO:0009944Biological Processpolarity specification of adaxial/abaxial axis
GO:0009956Biological Processradial pattern formation
GO:0010051Biological Processxylem and phloem pattern formation
GO:0010158Biological Processabaxial cell fate specification
GO:0048481Biological Processplant ovule development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 420 aa     Download sequence    Send to blast
MSMEGVFLEK TKSNTTTTLP DLSLHISLPD IHQYHHNESS KESSRRSSQP EHNNRSSNFE  60
LSLSHHNHPT TRIFHCPDRR TLNLPHQQHY YNPIINGGSL HHQRVDESEI SDLHRPIRGI  120
PVYHNRSFPF HQQNSPSSSL PSLGGGDLDQ ISILNSSSGY NNAYRSLQSS PRLKGVPLHH  180
HHHHNHYGSV VGSSDSSSPH HHNHHHHHHG MIRSRFLPKM PTKRSMRAPR MRWTSSLHAR  240
FVHAVELLGG HERRGDKSSH HYSMIIIQSF YVLLLNLLSD INLVMYRTVK TTNKPAASSD  300
GSGEEEMGIN GNEVHHHQSS TDQRAQSDDT SLHQEIDISS TQPRWSNSSR ETWPSSNNCS  360
SDIDTMIRTS STSMISHYQR SSLQNQEQRS NDQAKRCGDL SCNNPSLEFT LGRPDWHEK*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAY0301920.0AY030192.1 Arabidopsis thaliana clone A1-2 KANADI protein (KAN) mRNA, complete cds.
GenBankAY0486880.0AY048688.1 Arabidopsis thaliana GARP-like putative transcription factor KANADI1 (KAN1) mRNA, complete cds.
GenBankBT0264360.0BT026436.1 Arabidopsis thaliana At5g16560 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002873783.10.0predicted protein
SwissprotQ93WJ90.0KAN1_ARATH; Transcription repressor KAN1
TrEMBLD7M8610.0D7M861_ARALL; Predicted protein
STRINGAl_scaffold_0006_15650.0(Arabidopsis lyrata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM66062645
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16560.10.0G2-like family protein